Feature Engineering 101: Prepping Your Ingredients for Success

Author

Numbers around us

Published

February 11, 2025

What is Feature Engineering?

Feature engineering is the process of transforming raw data into meaningful, informative variables that improve the predictive power of models. While machine learning algorithms can recognize patterns in data, they rely on well-prepared inputs to make accurate predictions.

Just like a chef carefully preps ingredients before cooking, a data scientist must refine raw data before passing it to a model. Messy, irrelevant, or unoptimized data can lead to poor performance, even with the best algorithms.

Think about cooking:

  • If you use high-quality, well-prepared ingredients, the final dish will be delicious and well-balanced.

  • If you throw in random, untested elements, your dish (model) may taste awful or even fail.

Similarly, the difference between an amateur and a professional chef is knowing:
✔️ What ingredients (features) work best together.
✔️ Which ones to remove to avoid ruining the dish (model).
✔️ How to adjust flavors (transformations) for the best final result.

Why Feature Engineering is Crucial in Data Science

Even the most advanced machine learning models rely on quality data. No amount of hyperparameter tuning can compensate for bad feature selection or poor transformations.

Good Feature Engineering Leads to:

Higher Predictive Accuracy: Well-chosen features improve a model’s ability to generalize.
Faster Model Training: Reducing unnecessary features speeds up training.
Better Interpretability: Features that make sense allow for easier debugging and analysis.
Reduced Overfitting: Eliminating redundant or misleading features helps prevent the model from memorizing noise.

Without feature engineering, you may be using irrelevant, noisy, or redundant data, which can lead to worse results, longer training times, and overfitting.

How Features Impact Model Performance: A Real-World Example

Let’s say we are building a machine learning model to predict house prices based on available data. Our dataset contains:

  • Square footage of the house

  • Number of bedrooms

  • Number of bathrooms

  • Location

  • Age of the house

This is a decent starting point, but it may not be enough for a high-quality model.

How Feature Engineering Improves This Dataset:

Feature Raw Form Engineered Version Why It’s Useful
Square Footage 2500 Price per square foot = price / sqft Normalizes pricing across house sizes
Location “Downtown” Distance to city center (km) Captures geographic price variation
Bedrooms & Bathrooms 3 beds, 2 baths Room-to-bathroom ratio = beds/baths Reflects usability of space
House Age 15 years Has Renovation (1/0) Highlights recent renovations
Lot Size 5000 sqft Lot Size to House Ratio = lot sqft / house sqft Identifies whether land size impacts pricing

Each of these engineered features can add valuable insights, making the model more robust and predictive.

When Do You Need Feature Engineering?

Not every dataset requires extensive feature engineering, but certain situations make it absolutely necessary:

When your raw data lacks meaningful predictors:

  • Example: Predicting user churn in an app based only on login frequency. A better approach might involve time-based features (e.g., “days since last login,” “average session length”).

When raw variables have nonlinear relationships with the target:

  • Example: The relationship between income and spending habits may not be linear. Log transformations or percentiles can help normalize these relationships.

When there are many categorical variables:

  • Example: A dataset with country names will be more useful if transformed into continent-based grouping or encoded into clustering-friendly formats.

When working with time-series data:

  • Example: Instead of using raw timestamps, extracting day of the week, month, quarter, and seasonality patterns can reveal meaningful trends.

Common Challenges in Feature Engineering

Feature engineering is powerful, but it comes with its own set of challenges:

Overfitting to Training Data → Adding too many engineered features may create spurious correlations that don’t generalize well.
High-Dimensional Data → If you add too many features, it can increase complexity without meaningful improvement.
Correlation Between Features → Some features may be redundant or highly correlated, reducing the benefit of adding them.
Computational Cost → Complex transformations (e.g., Fourier features for time-series data) may be too expensive for real-time applications.

Summary: Why Feature Engineering is Like Cooking

  • Just like a great meal depends on carefully prepped ingredients, a great model depends on carefully chosen features.

  • Some raw ingredients (features) need to be cleaned, processed, and refined to be useful.

  • Too many ingredients (features) can overwhelm the dish (model), making it confusing and ineffective.

  • The right balance leads to the best results—for both cooking and machine learning.

What Makes a Good Feature?

Defining a “Good” Feature

Not all features are created equal. Some enhance a model’s predictive power, while others add noise or redundancy. The difference between a good and bad feature is similar to choosing the right ingredients for a recipe—some elements elevate the dish, while others clash or dilute the flavors.

A Good Feature Should Be:

Relevant – It has a meaningful relationship with the target variable.
Predictive – It improves the model’s ability to make accurate predictions.
Independent – It adds new information rather than repeating existing data.
Interpretable – It makes logical sense and can be explained to stakeholders.
Efficient – It balances performance improvement with computational cost.

1️⃣ Relevance: Does the Feature Matter for Prediction?

A feature is relevant if it has a meaningful correlation with the outcome we’re trying to predict.

Example: Predicting Car Prices

If we are building a model to predict car prices, which of the following features are relevant?

Feature Relevant? Why?
Engine Size ✅ Yes Larger engines generally increase car price.
Number of Cup Holders ❌ No This has little to no impact on price.
Brand Name ✅ Yes Premium brands usually have higher prices.
Car Color ❓ Maybe If certain colors have higher resale value, it may be relevant.

👉 Lesson: Just because a variable is available in the dataset doesn’t mean it’s useful.

How to Test Feature Relevance?

  • Correlation (Pearson/Spearman): Measures how strongly a numerical feature is related to the target variable.

  • ANOVA/F-test: Tests whether categorical variables significantly impact the target.

  • Mutual Information: Measures nonlinear relationships between features and the target.

2️⃣ Predictiveness: Does the Feature Improve Model Accuracy?

Even if a feature is somewhat relevant, it may not meaningfully improve predictions. Features with low predictive power add noise rather than useful signals.

Example: Predicting Employee Turnover

We want to predict whether an employee will leave a company. Consider these two features:

  1. Salary Increase in the Last Year (%)

  2. Employee’s ID Number

✔️ The salary increase may predict retention (employees with high raises may stay).
❌ The employee ID number has no meaningful impact on turnover.

How to Measure Predictiveness?

  • Train a simple model using just one feature at a time.

  • Check model accuracy: If removing the feature doesn’t change accuracy, it’s probably useless.

  • Feature importance scores from decision trees or SHAP values.

3️⃣ Independence: Does the Feature Add Unique Information?

A good feature should provide new insights rather than duplicate existing data.

Example: Redundant Features in a Dataset

We are predicting house prices and have these features:

  • House Size (sqft)

  • Number of Rooms

  • Number of Bedrooms

The number of rooms is already captured by house size—it doesn’t add much new information.

How to Detect Redundancy?

  • Correlation Matrix: If two features have a correlation > 0.9, one can often be removed.

  • Variance Inflation Factor (VIF): High values indicate redundant predictors.

  • PCA (Principal Component Analysis): Reduces redundancy by creating new composite features.

4️⃣ Interpretability: Can You Explain It?

Features should make logical sense to humans, not just models.

Example: Black-Box vs. Explainable Features

A deep learning model may create complex interactions between features that work well but are hard to interpret.

💡 If stakeholders need to understand why a model is making decisions (e.g., in finance or healthcare), simple, well-explained features are preferable.

How to Improve Interpretability?

  • Use domain knowledge to select meaningful features.

  • Avoid overly complex transformations (e.g., high-degree polynomial features).

  • Use SHAP values to explain feature impact.

5️⃣ Efficiency: Is the Feature Computationally Feasible?

Some features require significant processing power. If a feature takes too long to compute, it may not be worth the cost.

Example: Predicting Customer Churn with Clickstream Data

  • Basic Features (Efficient)

    • Number of logins in the last month

    • Average session duration

  • Complex Features (Expensive)

    • NLP-based topic modeling on user chat logs

    • Image recognition of uploaded user photos

While complex features may add predictive power, they can increase training time, require large datasets, and be difficult to scale.

When to Keep Expensive Features?

✅ If they significantly boost accuracy.
✅ If model interpretability isn’t a major concern.
✅ If computing resources aren’t a bottleneck.

Putting It All Together: A Feature Engineering Checklist

Criteria Questions to Ask
Relevance Does the feature have a logical connection to the target variable?
Predictiveness Does including this feature improve model accuracy?
Independence Does this feature add new information rather than duplicate existing features?
Interpretability Can you explain why this feature matters?
Efficiency Is it computationally feasible to calculate this feature?

Feature Creation vs. Feature Selection vs. Feature Extraction

Now that we understand what makes a good feature, it’s time to explore the three core processes of feature engineering:

1️⃣ Feature Creation – Designing new features from existing data.
2️⃣ Feature Selection – Choosing only the most valuable features for a model.
3️⃣ Feature Extraction – Transforming raw features into a more useful representation.

Each of these steps plays a crucial role in improving model performance while balancing accuracy, interpretability, and efficiency.

1️⃣ Feature Creation: Generating New Insights from Data

Feature creation is about deriving new, meaningful variables from raw data. This step is often the key to unlocking hidden patterns that improve model performance.

📌 Example: Predicting House Prices

Consider a dataset with the following raw variables:

  • Total square footage

  • Number of rooms

  • Year built

While these raw variables provide some insights, we can create new features that add even more value:

New Feature Formula / Definition Why It’s Useful?
Price per square foot price / sqft Normalizes price differences between large and small houses.
Room-to-bathroom ratio num_rooms / num_bathrooms Helps capture the usability of space.
House Age Current Year - Year Built Older homes may have lower values.
Renovation Status 1 if last_renovation > 10 years ago, else 0 Highlights recently updated homes.

Lesson: By engineering new features, we often improve model performance more than just adding more raw data.

Common Feature Creation Techniques

Mathematical Transformations – Log transformations, exponentiation, ratios.
Aggregations – Mean, sum, count over groups (e.g., total purchases per customer).
Interaction Features – Multiplying or dividing two variables (e.g., room-to-bathroom ratio).
Domain-Specific Features – Industry-based insights (e.g., calculating BMI from height & weight).

2️⃣ Feature Selection: Keeping Only the Best Ingredients

Feature selection is the process of choosing the most relevant features while removing redundant or irrelevant ones.

Why Feature Selection Matters

  • Too many features increase model complexity and risk overfitting.

  • Some features may be correlated and not provide new information.

  • Unimportant features can slow down model training without improving accuracy.

📌 Example: Predicting Employee Churn

We have the following features in our dataset:

  • Employee Age

  • Years at Company

  • Department

  • Salary

  • Coffee Consumption (cups per day)

Applying Feature Selection

  • Step 1: Check Correlation

    • If Years at Company and Employee Age are highly correlated, we may drop one.
  • Step 2: Test Feature Importance

    • If Coffee Consumption has no relationship with churn, it’s removed.
  • Step 3: Model-Based Selection

    • Use techniques like SHAP values, Lasso Regression, or Decision Trees to rank feature importance.

Methods for Feature Selection

Filter Methods:

  • Correlation Analysis: Drop highly correlated features.

  • Chi-Square Test: Checks relationships between categorical variables.
    Wrapper Methods:

  • Recursive Feature Elimination (RFE): Iteratively removes the weakest features.

  • Forward/Backward Selection: Adds or removes features based on model performance.
    Embedded Methods:

  • Lasso (L1) Regression: Shrinks coefficients of weak predictors to zero.

  • Random Forest Feature Importance: Uses decision trees to rank feature usefulness.

3️⃣ Feature Extraction: Transforming Raw Data into New Representations

Feature extraction reduces dimensionality while retaining meaningful patterns. Instead of creating new features, we compress or transform existing ones.

📌 Example: Text Data in Sentiment Analysis

A raw dataset contains customer reviews like:

  • “The product was excellent and I will buy again!”

  • “Terrible experience. I regret this purchase.”

Instead of passing raw text into a model, we extract features such as:

Extracted Feature Example Why It’s Useful?
TF-IDF Score 0.85 (for “excellent”) Identifies important words.
Sentiment Score Positive (0.9) Captures the review’s mood.
Word Count 7 Short vs. long reviews may differ.

📌 Example: Principal Component Analysis (PCA) for Reducing Dimensions

Imagine a dataset with 100 highly correlated numerical features.

  • Instead of keeping all 100, PCA reduces it to 10 principal components while preserving most of the information.

  • This improves model performance and speed without losing predictive power.

Common Feature Extraction Techniques

Text Features: Bag-of-Words, TF-IDF, Word Embeddings (Word2Vec).
Image Features: Convolutional Neural Networks (CNNs) extract patterns.
Dimensionality Reduction: PCA, t-SNE, UMAP.
Frequency-Based Features: Fourier Transforms for time series data.

Comparing the Three Approaches

Method Goal Example
Feature Creation Generate new insights Creating “price per sqft” from “price” and “sqft”.
Feature Selection Keep the most relevant features Removing redundant columns like “age” and “years at company”.
Feature Extraction Compress data into a lower-dimensional space Using PCA to reduce 100 features into 10.

Choosing the Right Approach

  • Feature Creation is often the most valuable but requires domain knowledge.

  • Feature Selection prevents overfitting and reduces unnecessary complexity.

  • Feature Extraction is useful for high-dimensional data (e.g., images, text).

Tools for Feature Engineering in R and Python

Now that we understand feature creation, selection, and extraction, let’s explore the tools that make feature engineering more efficient in R and Python.

Why Use Specialized Feature Engineering Tools?

✔️ Efficiency: Automates repetitive transformations.
✔️ Reproducibility: Standardized workflows make models easier to maintain.
✔️ Scalability: Works well for both small and large datasets.
✔️ Error Reduction: Prevents common mistakes like data leakage.

1️⃣ Feature Engineering in R: The recipes Package (tidymodels)

The recipes package (part of tidymodels) provides a structured way to preprocess and transform data for modeling.

Key Features of recipes:

✔️ Handles missing values, scaling, encoding, and feature creation
✔️ Integrates directly into machine learning pipelines
✔️ Uses a stepwise, declarative approach

Example: Creating a Feature Engineering Recipe

We will use the built-in mtcars dataset to create new features and preprocess the data.

library(tidymodels)

mtcars = mtcars %>% mutate(cyl = as.factor(cyl), gear = as.factor(gear))

# Create a recipe for preprocessing
car_recipe <- recipe(mpg ~ ., data = mtcars) %>%
  step_log(hp, base = 10) %>%   # Log transform horsepower
  step_normalize(disp, wt) %>%  # Scale displacement and weight
  step_dummy(cyl, gear) %>%     # One-hot encode categorical variables
  step_interact(terms = ~ hp:wt) # Create an interaction term

# Print recipe
car_recipe

# # ── Recipe ────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────
# 
# ── Inputs 
# Number of variables by role
# outcome:    1
# predictor: 10
# 
# ── Operations 
# • Log transformation on: hp
# • Centering and scaling for: disp and wt
# • Dummy variables from: cyl and gear
# • Interactions with: hp:wt

# Prepare the recipe and apply it to the data
prepped_recipe <- prep(car_recipe, training = mtcars)
transformed_data <- bake(prepped_recipe, new_data = mtcars)

head(transformed_data)

# # A tibble: 6 × 14
#      disp    hp  drat       wt  qsec    vs    am  carb   mpg cyl_X6 cyl_X8 gear_X4 gear_X5  hp_x_wt
#     <dbl> <dbl> <dbl>    <dbl> <dbl> <dbl> <dbl> <dbl> <dbl>  <dbl>  <dbl>   <dbl>   <dbl>    <dbl>
# 1 -0.571   2.04  3.9  -0.610    16.5     0     1     4  21        1      0       1       0 -1.25   
# 2 -0.571   2.04  3.9  -0.350    17.0     0     1     4  21        1      0       1       0 -0.714  
# 3 -0.990   1.97  3.85 -0.917    18.6     1     1     1  22.8      0      0       1       0 -1.81   
# 4  0.220   2.04  3.08 -0.00230  19.4     1     0     1  21.4      1      0       0       0 -0.00469
# 5  1.04    2.24  3.15  0.228    17.0     0     0     2  18.7      0      1       0       0  0.511  
# 6 -0.0462  2.02  2.76  0.248    20.2     1     0     1  18.1      1      0       0       0  0.501  

This automatically applies transformations to new data without manual intervention.

2️⃣ Feature Engineering in Python: pandas and scikit-learn Pipelines

Python provides pandas for data manipulation and scikit-learn for preprocessing within machine learning workflows.

Key Libraries for Feature Engineering:

✔️ pandas – Basic transformations (scaling, encoding, missing value handling).
✔️ scikit-learn.preprocessing – Standardized transformations.
✔️ featuretools – Automated feature engineering.

Example: Feature Engineering with pandas and scikit-learn

Using the classic iris dataset, we apply scaling, encoding, and feature interactions.

import pandas as pd
from sklearn.preprocessing import StandardScaler, OneHotEncoder
from sklearn.pipeline import Pipeline
from sklearn.compose import ColumnTransformer

# Load dataset
df = pd.read_csv("https://raw.githubusercontent.com/mwaskom/seaborn-data/master/iris.csv")

# Define numeric and categorical features
num_features = ['sepal_length', 'sepal_width']
cat_features = ['species']

# Define transformations
num_transformer = StandardScaler()
cat_transformer = OneHotEncoder()

# Combine transformations in a pipeline
preprocessor = ColumnTransformer([
    ('num', num_transformer, num_features),
    ('cat', cat_transformer, cat_features)
])

# Apply transformations
transformed_data = preprocessor.fit_transform(df)

print(transformed_data[:5])  # Show transformed data

# [[-0.90068117  1.01900435  1.          0.          0.        ]
#  [-1.14301691 -0.13197948  1.          0.          0.        ]
#  [-1.38535265  0.32841405  1.          0.          0.        ]
#  [-1.50652052  0.09821729  1.          0.          0.        ]
#  [-1.02184904  1.24920112  1.          0.          0.        ]]

Explanation:
StandardScaler() – Standardizes numerical features.
OneHotEncoder() – Converts categorical features into dummy variables.
ColumnTransformer() – Combines multiple transformations into a single step.

3️⃣ Feature Engineering with Automated Tools

For automating feature creation, we can use featuretools (Python) and vtreat (R).

📌 Auto Feature Engineering in R: vtreat

The vtreat package automates common transformations and handles messy data.

library(vtreat)

# Prepare treatment plan
plan <- designTreatmentsN(mtcars, varlist = c("hp", "wt"), outcomename = "mpg")

# [1] "vtreat 1.6.5 inspecting inputs Tue Feb 11 22:03:49 2025"
# [1] "designing treatments Tue Feb 11 22:03:49 2025"
# [1] " have initial level statistics Tue Feb 11 22:03:49 2025"
# [1] " scoring treatments Tue Feb 11 22:03:49 2025"
# [1] "have treatment plan Tue Feb 11 22:03:49 2025"


# Apply transformations
treated_data <- prepare(plan, mtcars)

head(treated_data)

#    hp    wt  mpg
# 1 110 2.620 21.0
# 2 110 2.875 21.0
# 3  93 2.320 22.8
# 4 110 3.215 21.4
# 5 175 3.440 18.7
# 6 105 3.460 18.1

Automatically encodes variables
Handles missing values and interactions
Useful for quick feature engineering

📌 Auto Feature Engineering in Python: featuretools

The featuretools package automatically generates new features from relational datasets.

import featuretools as ft

# Load dataset
df = ft.demo.load_mock_customer()["customers"]

# Define an entity set
es = ft.EntitySet(id="customers")
es = es.add_dataframe(dataframe_name="customers", dataframe=df, index="customer_id")

# Automatically create features
features, feature_defs = ft.dfs(entityset=es, target_dataframe_name="customers")

print(features.head())

#              zip_code DAY(birthday) DAY(join_date) MONTH(birthday) MONTH(join_date) WEEKDAY(birthday) WEEKDAY(join_date) YEAR(birthday) YEAR(join_date)
# customer_id
# 1               60091            18             17               7                4                 0                  6           1994            2011
# 2               13244            18             15               8                4                 0                  6           1986            2012
# 3               13244            21             13              11                8                 4                  5           2003            2011
# 4               60091            15              8               8                4                 1                  4           2006            2011
# 5               60091            28             17               7                7                 5                  5           1984            2010

Generates new time-based and aggregated features
Reduces manual effort in feature creation
Works well for relational datasets (e.g., customer transactions)

4️⃣ Feature Selection Tools in R and Python

Once we create features, we need to select the most important ones.

📌 Feature Selection in R (vip, glmnet)

library(vip)
library(glmnet)

# Train a Lasso model
x <- model.matrix(mpg ~ ., mtcars)[, -1]
y <- mtcars$mpg
lasso_model <- cv.glmnet(x, y, alpha = 1)

# Plot feature importance
vip(lasso_model)

SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSXC

📌 Feature Selection in Python (shap, SelectKBest)

import shap
from sklearn.ensemble import RandomForestRegressor
import pandas as pd

# Load dataset
df = pd.read_csv("https://raw.githubusercontent.com/mwaskom/seaborn-data/master/iris.csv")

# Define numeric and categorical features
num_features = ['sepal_length', 'sepal_width']
cat_features = ['species']

# Train a random forest model
model = RandomForestRegressor()
model.fit(df[num_features], df["petal_length"])

# Calculate SHAP values
explainer = shap.Explainer(model)
shap_values = explainer(df[num_features])

# Visualize feature importance
shap.summary_plot(shap_values, df[num_features])

Comparison: R vs. Python for Feature Engineering

Task R (recipes, vtreat) Python (pandas, featuretools)
Preprocessing step_*() in recipes ColumnTransformer()
Encoding step_dummy() OneHotEncoder()
Feature Creation mutate(), step_interact() featuretools.dfs()
Feature Selection vip::vi(), glmnet SelectKBest, shap

📌 Summary: Choosing the Right Tool

🔹 Use recipes (R) and pandas (Python) for manual feature engineering.
🔹 Use vtreat (R) and featuretools (Python) for automated feature creation.
🔹 Use vip (R) and shap (Python) for feature selection.

Best Practices & Common Pitfalls in Feature Engineering

Now that we have explored feature engineering techniques, let’s focus on best practices and the mistakes to avoid. Feature engineering can make or break a model, and following good principles helps ensure better performance and generalizability.

1️⃣ Best Practices for Feature Engineering

✅ 1. Use Domain Knowledge to Guide Feature Creation

🔹 The best features often come from understanding the problem, not just applying transformations.
🔹 Ask: What real-world factors influence the target variable?

📌 Example:
Predicting customer churn

  • Instead of just using number_of_logins, create “days since last login” to better capture customer behavior.

✅ 2. Keep It Simple: Avoid Overcomplicating Features

🔹 More features do not always mean better models—avoid unnecessary transformations.
🔹 Focus on interpretability: If a feature is too complex to explain, it may introduce unwanted noise.

📌 Example:
Instead of adding 5-degree polynomial features, a simple log transformation may be enough.

✅ 3. Check for Redundant or Highly Correlated Features

🔹 Features that contain the same information may confuse models and increase computation time.
🔹 How to detect?
Correlation matrix (Pearson/Spearman).
Variance Inflation Factor (VIF) (R).
SHAP values or feature importance plots (Python).

📌 Example:

  • Total number of rooms and house size in square feet may be highly correlated—dropping one avoids redundancy.

✅ 4. Normalize or Standardize When Needed

🔹 Some models (e.g., KNN, linear regression, neural networks) perform poorly with unscaled data.
🔹 Scaling ensures each feature contributes equally to model training.

📌 Example:

  • House price ranges from $50,000 to $2,000,000.

  • Bedrooms count ranges from 1 to 5.
    Solution: Standardizing prices helps prevent models from giving too much weight to large numerical values.

✅ 5. Use Cross-Validation When Testing Features

🔹 A feature may improve accuracy on the training set but not generalize to new data.
🔹 Use k-fold cross-validation to check how new features impact performance.

📌 Example:
A feature like “customer average spending in the last month” may work well during training but fail on customers who just signed up.

2️⃣ Common Pitfalls to Avoid

❌ 1. Feature Leakage (Using Future Information)

🔹 Using data that wouldn’t be available at prediction time leads to unrealistically high accuracy.
🔹 Always ensure feature values are only from past events.

📌 Example of Feature Leakage:
Predicting loan default

  • A feature like “loan repayment status” is not valid, because it’s already telling the model if the loan was paid or not.

❌ 2. Overfitting to Training Data

🔹 Over-engineering features may memorize patterns in the training data instead of finding general trends.
🔹 Avoid too many polynomial features or irrelevant categorical encodings.

📌 Example:
A model that includes zip code as a feature may perform well only on seen locations but fail when predicting in new areas.

❌ 3. Encoding High-Cardinality Categorical Variables Poorly

🔹 One-hot encoding thousands of categories results in huge feature matrices.
🔹 Instead, use:
Target encoding (replacing category with its mean target value).
Embedding layers (deep learning).

📌 Example:
A dataset with thousands of unique products—using one-hot encoding explodes feature space.

❌ 4. Ignoring Outliers Before Engineering Features

🔹 Some transformations (e.g., log scaling) fail when outliers exist.
🔹 Solution: Winsorize or use robust scaling to handle extreme values.

📌 Example:

  • Income dataset where 95% of people earn $50,000-$100,000, but one person earns $10M.

  • Without handling, the model may become biased towards extreme values.

📌 Summary: Best Practices & Pitfalls

✅ Best Practices ❌ Pitfalls to Avoid
Use domain knowledge for better feature creation Feature leakage—using future data
Keep it simple—avoid over-engineering Overfitting—too many complex transformations
Check correlations—remove redundant features Poor encoding of high-cardinality categorical variables
Scale features when needed Ignoring outliers before transformations
Validate with cross-validation Using irrelevant or noisy features

By following these principles, we ensure our models are trained on reliable, useful features—leading to better performance in real-world scenarios.

Best Practices & Common Pitfalls in Feature Engineering

Now that we have explored feature engineering techniques, let’s focus on best practices and the mistakes to avoid. Feature engineering can make or break a model, and following good principles helps ensure better performance and generalizability.

1️⃣ Best Practices for Feature Engineering

✅ 1. Use Domain Knowledge to Guide Feature Creation

🔹 The best features often come from understanding the problem, not just applying transformations.
🔹 Ask: What real-world factors influence the target variable?

📌 Example:
Predicting customer churn

  • Instead of just using number_of_logins, create “days since last login” to better capture customer behavior.

✅ 2. Keep It Simple: Avoid Overcomplicating Features

🔹 More features do not always mean better models—avoid unnecessary transformations.
🔹 Focus on interpretability: If a feature is too complex to explain, it may introduce unwanted noise.

📌 Example:
Instead of adding 5-degree polynomial features, a simple log transformation may be enough.

✅ 3. Check for Redundant or Highly Correlated Features

🔹 Features that contain the same information may confuse models and increase computation time.
🔹 How to detect?
Correlation matrix (Pearson/Spearman).
Variance Inflation Factor (VIF) (R).
SHAP values or feature importance plots (Python).

📌 Example:

  • Total number of rooms and house size in square feet may be highly correlated—dropping one avoids redundancy.

✅ 4. Normalize or Standardize When Needed

🔹 Some models (e.g., KNN, linear regression, neural networks) perform poorly with unscaled data.
🔹 Scaling ensures each feature contributes equally to model training.

📌 Example:

  • House price ranges from $50,000 to $2,000,000.

  • Bedrooms count ranges from 1 to 5.
    Solution: Standardizing prices helps prevent models from giving too much weight to large numerical values.

✅ 5. Use Cross-Validation When Testing Features

🔹 A feature may improve accuracy on the training set but not generalize to new data.
🔹 Use k-fold cross-validation to check how new features impact performance.

📌 Example:
A feature like “customer average spending in the last month” may work well during training but fail on customers who just signed up.

2️⃣ Common Pitfalls to Avoid

❌ 1. Feature Leakage (Using Future Information)

🔹 Using data that wouldn’t be available at prediction time leads to unrealistically high accuracy.
🔹 Always ensure feature values are only from past events.

📌 Example of Feature Leakage:
Predicting loan default

  • A feature like “loan repayment status” is not valid, because it’s already telling the model if the loan was paid or not.

❌ 2. Overfitting to Training Data

🔹 Over-engineering features may memorize patterns in the training data instead of finding general trends.
🔹 Avoid too many polynomial features or irrelevant categorical encodings.

📌 Example:
A model that includes zip code as a feature may perform well only on seen locations but fail when predicting in new areas.

❌ 3. Encoding High-Cardinality Categorical Variables Poorly

🔹 One-hot encoding thousands of categories results in huge feature matrices.
🔹 Instead, use:
Target encoding (replacing category with its mean target value).
Embedding layers (deep learning).

📌 Example:
A dataset with thousands of unique products—using one-hot encoding explodes feature space.

❌ 4. Ignoring Outliers Before Engineering Features

🔹 Some transformations (e.g., log scaling) fail when outliers exist.
🔹 Solution: Winsorize or use robust scaling to handle extreme values.

📌 Example:

  • Income dataset where 95% of people earn $50,000-$100,000, but one person earns $10M.

  • Without handling, the model may become biased towards extreme values.

📌 Summary: Best Practices & Pitfalls

✅ Best Practices ❌ Pitfalls to Avoid
Use domain knowledge for better feature creation Feature leakage—using future data
Keep it simple—avoid over-engineering Overfitting—too many complex transformations
Check correlations—remove redundant features Poor encoding of high-cardinality categorical variables
Scale features when needed Ignoring outliers before transformations
Validate with cross-validation Using irrelevant or noisy features

By following these principles, we ensure our models are trained on reliable, useful features—leading to better performance in real-world scenarios.

Conclusion & Next Steps

Feature engineering is both an art and a science—it bridges the gap between raw data and meaningful insights, ultimately determining whether a model performs well or fails to generalize. Throughout this article, we’ve explored the foundations of feature engineering, covering the essentials of feature creation, selection, and extraction, along with best practices to avoid common pitfalls.

🔹 Key Takeaways

Good features matter more than complex models—A well-engineered dataset can outperform advanced algorithms trained on poorly processed data.
Preprocessing is a critical first step—Handling missing values, scaling numerical features, and encoding categorical variables set the stage for effective transformations.
Feature engineering techniques vary—From polynomial transformations and interaction terms to log scaling and binning, different problems require different approaches.
Domain knowledge is key—Understanding the context behind the data leads to more meaningful, interpretable features.
Avoid feature leakage and overfitting—Ensuring that features reflect only past information and generalize well to unseen data is crucial for real-world applications.

🚀 What’s Next?

This article is just the beginning of a larger Feature Engineering Series! In the upcoming articles, we’ll take deep dives into specific techniques, such as:
📌 Transforming Categorical Variables—Beyond one-hot encoding, exploring techniques like target encoding and embeddings.
📌 Feature Engineering for Time Series Data—Creating lag features, moving averages, and handling seasonality.
📌 Text-Based Feature Engineering—Extracting insights using TF-IDF, word embeddings, and sentiment scores.
📌 Automated Feature Engineering—Using tools like featuretools (Python) and vtreat (R) to generate features at scale.

By applying these methods, you’ll gain the practical knowledge needed to craft better features, build stronger models, and make data-driven decisions more effectively.

🔹 Next up: “Mastering the Spice Rack – Transforming Categorical Features”—where we explore the best techniques for handling categorical data to maximize model performance!

💡 Let’s discuss! What’s your go-to feature engineering trick? Drop your thoughts below! ⬇⬇⬇